sisl
v0.10.0
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Index
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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X
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Y
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Z
A
a2isc() (sisl.Geometry method)
a2o() (sisl.Geometry method)
a2p() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
a2sc() (sisl.Geometry method)
a2transpose() (sisl.Geometry method)
a_buf() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
a_dev() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
a_down() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
a_elec() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
add() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
add_sile() (in module sisl.io)
add_vacuum() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
Adensity_matrix() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
ADOS() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
agnr() (in module sisl.geom)
align() (sisl.SparseCSR method)
align_norm() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
align_phase() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
angle() (in module sisl.utils)
(sisl.Geometry method)
(sisl.Quaternion property)
(sisl.SuperCell method)
append() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.oplist method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.Selector method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
apply (sisl.physics.BandStructure attribute)
(sisl.physics.BrillouinZone attribute)
(sisl.physics.brillouinzone.BandStructure attribute)
(sisl.physics.brillouinzone.BrillouinZone attribute)
(sisl.physics.brillouinzone.MonkhorstPack attribute)
(sisl.physics.MonkhorstPack attribute)
apply_newton() (sisl.physics.DynamicalMatrix method)
area() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
args (sisl.io.SileError attribute)
array_arange() (in module sisl.utils)
as_integer_ratio() (sisl.constant.PhysicalConstant method)
as_primary() (sisl.Geometry method)
asarray() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
asaverage() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
asc2uc() (sisl.Geometry method)
asciiSileBigDFT (class in sisl.io.bigdft)
asCoefficient() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.StateC method)
asgrid() (sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
aslist() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
asnone() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
asState() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.StateC method)
assum() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
asyield() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
Atom (class in sisl)
atom (sisl.Atoms attribute)
atom() (sisl.Atoms property)
(sisl.Geometry property)
atom_ACOHP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atom_ACOOP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atom_COHP (sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
atom_COHP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COHP_from_orbital() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atom_COOP (sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
atom_COOP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
atom_COOP_from_orbital() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atom_current() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atom_current_from_orbital() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
atomic_mass() (sisl.PeriodicTable method)
AtomicOrbital (class in sisl)
Atoms (class in sisl)
atoms (sisl.Geometry attribute)
atoms() (sisl.Geometry property)
attach() (sisl.Geometry method)
auc2sc() (sisl.Geometry method)
average() (sisl.Grid method)
axyz() (sisl.Geometry method)
B
bandsSileSiesta (class in sisl.io.siesta)
BandStructure (class in sisl.physics)
(class in sisl.physics.brillouinzone)
base_file() (sisl.io.BaseSile property)
(sisl.io.bigdft.asciiSileBigDFT property)
(sisl.io.cube.cubeSile property)
(sisl.io.gulp.fcSileGULP property)
(sisl.io.gulp.gotSileGULP property)
(sisl.io.molden.moldenSile property)
(sisl.io.openmx.omxSileOpenMX property)
(sisl.io.pdb.pdbSile property)
(sisl.io.scaleup.orboccSileScaleUp property)
(sisl.io.scaleup.refSileScaleUp property)
(sisl.io.scaleup.rhamSileScaleUp property)
(sisl.io.siesta.bandsSileSiesta property)
(sisl.io.siesta.dmSileSiesta property)
(sisl.io.siesta.eigSileSiesta property)
(sisl.io.siesta.faSileSiesta property)
(sisl.io.siesta.fcSileSiesta property)
(sisl.io.siesta.fdfSileSiesta property)
(sisl.io.siesta.gridncSileSiesta property)
(sisl.io.siesta.gridSileSiesta property)
(sisl.io.siesta.hsxSileSiesta property)
(sisl.io.siesta.ionncSileSiesta property)
(sisl.io.siesta.ionxmlSileSiesta property)
(sisl.io.siesta.kpSileSiesta property)
(sisl.io.siesta.ncSileSiesta property)
(sisl.io.siesta.onlysSileSiesta property)
(sisl.io.siesta.orbindxSileSiesta property)
(sisl.io.siesta.outSileSiesta property)
(sisl.io.siesta.pdosSileSiesta property)
(sisl.io.siesta.rkpSileSiesta property)
(sisl.io.siesta.tsdeSileSiesta property)
(sisl.io.siesta.tsgfSileSiesta property)
(sisl.io.siesta.tshsSileSiesta property)
(sisl.io.siesta.tsvncSileSiesta property)
(sisl.io.siesta.wfsxSileSiesta property)
(sisl.io.siesta.xvSileSiesta property)
(sisl.io.Sile property)
(sisl.io.SileBin property)
(sisl.io.SileCDF property)
(sisl.io.table.tableSile property)
(sisl.io.tbtrans.deltancSileTBtrans property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtgfSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.io.vasp.carSileVASP property)
(sisl.io.vasp.chgSileVASP property)
(sisl.io.vasp.doscarSileVASP property)
(sisl.io.vasp.eigenvalSileVASP property)
(sisl.io.vasp.locpotSileVASP property)
(sisl.io.wannier90.winSileWannier90 property)
(sisl.io.xsf.xsfSile property)
(sisl.io.xyz.xyzSile property)
BaseSile (class in sisl.io)
bcc() (in module sisl.geom)
BDOS() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
berry_curvature() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
berry_phase() (in module sisl.physics.electron)
best() (sisl.Selector property)
bilayer() (in module sisl.geom)
Bloch (class in sisl.physics)
(class in sisl.physics.bloch)
bloch() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.Bloch property)
(sisl.physics.bloch.Bloch property)
bond_correct() (sisl.Geometry method)
bond_current() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
bond_current_from_orbital() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
bose_einstein() (in module sisl.physics)
(in module sisl.physics.distribution)
BrillouinZone (class in sisl.physics)
(class in sisl.physics.brillouinzone)
btd() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
C
c (in module sisl.constant)
(sisl.physics.Coefficient attribute)
,
[1]
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.StateC attribute)
,
[1]
call() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
carSileVASP (class in sisl.io.vasp)
cell (sisl.SuperCell attribute)
,
[1]
cell() (sisl.Geometry property)
(sisl.Grid property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.physics.BandStructure property)
(sisl.physics.BrillouinZone property)
(sisl.physics.brillouinzone.BandStructure property)
(sisl.physics.brillouinzone.BrillouinZone property)
(sisl.physics.brillouinzone.MonkhorstPack property)
(sisl.physics.MonkhorstPack property)
cell_length() (sisl.SuperCell method)
center() (sisl.Geometry method)
(sisl.shape.Cube property)
(sisl.shape.Cuboid property)
(sisl.shape.Ellipsoid property)
(sisl.shape.NullShape property)
(sisl.shape.Shape property)
(sisl.shape.Sphere property)
(sisl.SuperCell method)
change_gauge() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
characters_written (sisl.io.SileError attribute)
chemical_potential (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
chemical_potential() (sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
chgSileVASP (class in sisl.io.vasp)
clear() (sisl.oplist method)
(sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
close() (sisl.Geometry method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.SileCDF method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
close_sc() (sisl.Geometry method)
Coefficient (class in sisl.physics)
CoefficientElectron (class in sisl.physics.electron)
CoefficientPhonon (class in sisl.physics.phonon)
col (sisl.SparseCSR attribute)
,
[1]
cold() (in module sisl.physics)
(in module sisl.physics.distribution)
conductivity() (in module sisl.physics.electron)
conj() (sisl.Quaternion method)
conjugate() (sisl.constant.PhysicalConstant method)
construct() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
copy() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.oplist method)
(sisl.Orbital method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.Coefficient method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.Overlap method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.Spin method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.Quaternion method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.Sphere method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
count() (sisl.oplist method)
create_construct() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
cross_section() (sisl.Grid method)
Cube (class in sisl.shape)
cubeSile (class in sisl.io.cube)
Cuboid (class in sisl.shape)
current (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
(sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
current() (sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
current_parameter (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
(sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
current_parameter() (sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
cut() (sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
D
D() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
data (sisl.SparseCSR attribute)
data() (sisl.SparseCSR property)
dcell() (sisl.Grid property)
ddDk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
ddEk() (sisl.physics.EnergyDensityMatrix method)
ddHk() (sisl.physics.Hamiltonian method)
dDk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
ddSk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
decorate() (sisl.oplist class method)
degenerate() (sisl.physics.Coefficient method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.StateC method)
degree() (sisl.Quaternion property)
dEk() (sisl.physics.EnergyDensityMatrix method)
delete_columns() (sisl.SparseCSR method)
deltancSileTBtrans (class in sisl.io.tbtrans)
density() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
density_matrix (sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
density_matrix() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
DensityMatrix (class in sisl.physics)
dHk() (sisl.physics.Hamiltonian method)
diagonal() (sisl.SparseCSR method)
diags() (sisl.SparseCSR method)
diamond() (in module sisl.geom)
dim (sisl.SparseCSR attribute)
dim() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
dir_file() (sisl.io.BaseSile method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.wfsxSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
direction() (in module sisl.utils)
DIRICHLET (sisl.Grid attribute)
disk_usage() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
displacement() (in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
distance() (sisl.Geometry method)
Dk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
dkind() (sisl.Grid property)
(sisl.physics.Coefficient property)
(sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EigenmodePhonon property)
(sisl.physics.EigenstateElectron property)
(sisl.physics.EigenvalueElectron property)
(sisl.physics.EigenvaluePhonon property)
(sisl.physics.EigenvectorElectron property)
(sisl.physics.EigenvectorPhonon property)
(sisl.physics.electron.CoefficientElectron property)
(sisl.physics.electron.EigenstateElectron property)
(sisl.physics.electron.EigenvalueElectron property)
(sisl.physics.electron.EigenvectorElectron property)
(sisl.physics.electron.StateCElectron property)
(sisl.physics.electron.StateElectron property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.phonon.CoefficientPhonon property)
(sisl.physics.phonon.EigenmodePhonon property)
(sisl.physics.phonon.EigenvaluePhonon property)
(sisl.physics.phonon.EigenvectorPhonon property)
(sisl.physics.phonon.ModeCPhonon property)
(sisl.physics.phonon.ModePhonon property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.physics.Spin property)
(sisl.physics.State property)
(sisl.physics.StateC property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
dmSileSiesta (class in sisl.io.siesta)
DOS() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.Hamiltonian method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
doscarSileVASP (class in sisl.io.vasp)
dSk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
dtype() (sisl.Grid property)
(sisl.physics.Coefficient property)
(sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EigenmodePhonon property)
(sisl.physics.EigenstateElectron property)
(sisl.physics.EigenvalueElectron property)
(sisl.physics.EigenvaluePhonon property)
(sisl.physics.EigenvectorElectron property)
(sisl.physics.EigenvectorPhonon property)
(sisl.physics.electron.CoefficientElectron property)
(sisl.physics.electron.EigenstateElectron property)
(sisl.physics.electron.EigenvalueElectron property)
(sisl.physics.electron.EigenvectorElectron property)
(sisl.physics.electron.StateCElectron property)
(sisl.physics.electron.StateElectron property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.phonon.CoefficientPhonon property)
(sisl.physics.phonon.EigenmodePhonon property)
(sisl.physics.phonon.EigenvaluePhonon property)
(sisl.physics.phonon.EigenvectorPhonon property)
(sisl.physics.phonon.ModeCPhonon property)
(sisl.physics.phonon.ModePhonon property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.physics.Spin property)
(sisl.physics.State property)
(sisl.physics.StateC property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
dvolume() (sisl.Grid property)
DynamicalMatrix (class in sisl.physics)
E
E() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.physics.EnergyDensityMatrix property)
edge_length() (sisl.shape.Cube property)
(sisl.shape.Cuboid property)
edges() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
eig() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenstateElectron property)
(sisl.physics.EigenvalueElectron property)
(sisl.physics.electron.EigenstateElectron property)
(sisl.physics.electron.EigenvalueElectron property)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigenmode() (sisl.physics.DynamicalMatrix method)
EigenmodePhonon (class in sisl.physics)
(class in sisl.physics.phonon)
eigenstate() (sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.physics.Hamiltonian method)
EigenstateElectron (class in sisl.physics)
(class in sisl.physics.electron)
eigenvalSileVASP (class in sisl.io.vasp)
eigenvalue() (sisl.physics.DynamicalMatrix method)
(sisl.physics.Hamiltonian method)
EigenvalueElectron (class in sisl.physics)
(class in sisl.physics.electron)
EigenvaluePhonon (class in sisl.physics)
(class in sisl.physics.phonon)
EigenvectorElectron (class in sisl.physics)
(class in sisl.physics.electron)
EigenvectorPhonon (class in sisl.physics)
(class in sisl.physics.phonon)
eigh() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigsh() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
eigSileSiesta (class in sisl.io.siesta)
Eindex() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
Ek() (sisl.physics.EnergyDensityMatrix method)
elecs() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
electron_temperature (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
electron_temperature() (sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
eliminate_zeros() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
Ellipsoid (class in sisl.shape)
empty() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
EnergyDensityMatrix (class in sisl.physics)
equal() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
erange() (in module sisl.utils)
errno (sisl.io.SileError attribute)
eta() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
exist() (sisl.io.BaseSile method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.wfsxSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
expand() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Sphere method)
expectation() (sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
extend() (sisl.oplist method)
F
f (sisl.AtomicOrbital attribute)
(sisl.SphericalOrbital attribute)
,
[1]
f() (sisl.AtomicOrbital property)
fano (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
fano() (sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
faSileSiesta (class in sisl.io.siesta)
fcc() (in module sisl.geom)
fcSileGULP (class in sisl.io.gulp)
fcSileSiesta (class in sisl.io.siesta)
fdfSileSiesta (class in sisl.io.siesta)
fermi_dirac() (in module sisl.physics)
(in module sisl.physics.distribution)
fermi_level() (sisl.physics.Hamiltonian method)
file() (sisl.io.BaseSile property)
(sisl.io.bigdft.asciiSileBigDFT property)
(sisl.io.cube.cubeSile property)
(sisl.io.gulp.fcSileGULP property)
(sisl.io.gulp.gotSileGULP property)
(sisl.io.molden.moldenSile property)
(sisl.io.openmx.omxSileOpenMX property)
(sisl.io.pdb.pdbSile property)
(sisl.io.scaleup.orboccSileScaleUp property)
(sisl.io.scaleup.refSileScaleUp property)
(sisl.io.scaleup.rhamSileScaleUp property)
(sisl.io.siesta.bandsSileSiesta property)
(sisl.io.siesta.dmSileSiesta property)
(sisl.io.siesta.eigSileSiesta property)
(sisl.io.siesta.faSileSiesta property)
(sisl.io.siesta.fcSileSiesta property)
(sisl.io.siesta.fdfSileSiesta property)
(sisl.io.siesta.gridncSileSiesta property)
(sisl.io.siesta.gridSileSiesta property)
(sisl.io.siesta.hsxSileSiesta property)
(sisl.io.siesta.ionncSileSiesta property)
(sisl.io.siesta.ionxmlSileSiesta property)
(sisl.io.siesta.kpSileSiesta property)
(sisl.io.siesta.ncSileSiesta property)
(sisl.io.siesta.onlysSileSiesta property)
(sisl.io.siesta.orbindxSileSiesta property)
(sisl.io.siesta.outSileSiesta property)
(sisl.io.siesta.pdosSileSiesta property)
(sisl.io.siesta.rkpSileSiesta property)
(sisl.io.siesta.tsdeSileSiesta property)
(sisl.io.siesta.tsgfSileSiesta property)
(sisl.io.siesta.tshsSileSiesta property)
(sisl.io.siesta.tsvncSileSiesta property)
(sisl.io.siesta.wfsxSileSiesta property)
(sisl.io.siesta.xvSileSiesta property)
(sisl.io.Sile property)
(sisl.io.SileBin property)
(sisl.io.SileCDF property)
(sisl.io.table.tableSile property)
(sisl.io.tbtrans.deltancSileTBtrans property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtgfSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.io.vasp.carSileVASP property)
(sisl.io.vasp.chgSileVASP property)
(sisl.io.vasp.doscarSileVASP property)
(sisl.io.vasp.eigenvalSileVASP property)
(sisl.io.vasp.locpotSileVASP property)
(sisl.io.wannier90.winSileWannier90 property)
(sisl.io.xsf.xsfSile property)
(sisl.io.xyz.xyzSile property)
fileindex() (in module sisl.utils)
filename (sisl.io.SileError attribute)
filename2 (sisl.io.SileError attribute)
fill() (sisl.Grid method)
finalize() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
finalized (sisl.SparseCSR attribute)
finalized() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
firsto (sisl.Atoms attribute)
firsto() (sisl.Atoms property)
(sisl.Geometry property)
fit() (sisl.SuperCell method)
fromASE() (sisl.Geometry class method)
fromhex() (sisl.constant.PhysicalConstant method)
fromsp() (sisl.physics.DensityMatrix class method)
(sisl.physics.DynamicalMatrix class method)
(sisl.physics.EnergyDensityMatrix class method)
(sisl.physics.Hamiltonian class method)
(sisl.physics.Overlap class method)
(sisl.physics.SparseOrbitalBZ class method)
(sisl.physics.SparseOrbitalBZSpin class method)
(sisl.SparseAtom class method)
(sisl.SparseCSR class method)
(sisl.SparseOrbital class method)
fxyz() (sisl.Geometry property)
G
G (in module sisl.constant)
G0 (in module sisl.constant)
gaussian() (in module sisl.physics)
(in module sisl.physics.distribution)
geom() (sisl.Grid property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.SparseAtom property)
(sisl.SparseOrbital property)
Geometry (class in sisl)
geometry() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.SparseAtom property)
(sisl.SparseOrbital property)
geometry_group() (sisl.io.vasp.carSileVASP static method)
(sisl.io.vasp.chgSileVASP static method)
(sisl.io.vasp.doscarSileVASP static method)
(sisl.io.vasp.eigenvalSileVASP static method)
(sisl.io.vasp.locpotSileVASP static method)
get() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
get_distribution() (in module sisl.physics)
(in module sisl.physics.distribution)
get_sile() (in module sisl.io)
get_sile_class() (in module sisl.io)
get_siles() (in module sisl.io)
gotSileGULP (class in sisl.io.gulp)
graphene_nanoribbon() (in module sisl.geom)
green() (sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
(sisl.physics.RecursiveSI method)
Grid (class in sisl)
grid() (sisl.physics.brillouinzone.MonkhorstPack class method)
(sisl.physics.MonkhorstPack class method)
grid_unit (sisl.io.siesta.gridSileSiesta attribute)
gridncSileSiesta (class in sisl.io.siesta)
grids() (sisl.io.siesta.ncSileSiesta property)
gridSileSiesta (class in sisl.io.siesta)
H
h (in module sisl.constant)
H() (sisl.physics.Hamiltonian property)
Hamiltonian (class in sisl.physics)
has_noncolinear() (sisl.physics.Spin property)
hassame() (sisl.Atoms method)
hbar (in module sisl.constant)
hcp() (in module sisl.geom)
heaviside() (in module sisl.physics)
(in module sisl.physics.distribution)
hex() (sisl.constant.PhysicalConstant method)
Hk() (sisl.physics.Hamiltonian method)
HkSk() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
honeycomb() (in module sisl.geom)
hsxSileSiesta (class in sisl.io.siesta)
hw() (sisl.physics.EigenmodePhonon property)
(sisl.physics.EigenvaluePhonon property)
(sisl.physics.phonon.EigenmodePhonon property)
(sisl.physics.phonon.EigenvaluePhonon property)
I
icell (sisl.SuperCell attribute)
icell() (sisl.Geometry property)
(sisl.Grid property)
(sisl.SuperCell property)
imag (sisl.constant.PhysicalConstant attribute)
in_primitive() (sisl.physics.BandStructure static method)
(sisl.physics.BrillouinZone static method)
(sisl.physics.brillouinzone.BandStructure static method)
(sisl.physics.brillouinzone.BrillouinZone static method)
(sisl.physics.brillouinzone.MonkhorstPack static method)
(sisl.physics.MonkhorstPack static method)
includes() (sisl.io.siesta.fdfSileSiesta method)
index() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Grid method)
(sisl.oplist method)
index2xyz() (sisl.Grid method)
index_fold() (sisl.Grid method)
index_truncate() (sisl.Grid method)
info (sisl.physics.Coefficient attribute)
,
[1]
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
(sisl.physics.State attribute)
,
[1]
(sisl.physics.StateC attribute)
,
[1]
info() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
initialize() (sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
inner() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
insert() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.oplist method)
interp() (sisl.Grid method)
inv_eff_mass_tensor() (sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
ionncSileSiesta (class in sisl.io.siesta)
ionxmlSileSiesta (class in sisl.io.siesta)
iR() (sisl.Geometry method)
is_colinear() (sisl.physics.Spin property)
is_integer() (sisl.constant.PhysicalConstant method)
is_noncolinear() (sisl.physics.Spin property)
is_orthogonal() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
is_polarized() (sisl.physics.Spin property)
is_spinorbit() (sisl.physics.Spin property)
is_unpolarized() (sisl.physics.Spin property)
isc_off() (sisl.Geometry property)
(sisl.Grid property)
(sisl.SuperCell property)
iter() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.SileCDF method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.Coefficient method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
iter_block() (sisl.Geometry method)
iter_block_rand() (sisl.Geometry method)
iter_block_shape() (sisl.Geometry method)
iter_nnz() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
iter_orbitals() (sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
iter_shape() (in module sisl.utils)
iter_species() (sisl.Geometry method)
J
job_completed() (sisl.io.siesta.outSileSiesta property)
K
k() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
(sisl.physics.BandStructure property)
(sisl.physics.BrillouinZone property)
(sisl.physics.brillouinzone.BandStructure property)
(sisl.physics.brillouinzone.BrillouinZone property)
(sisl.physics.brillouinzone.MonkhorstPack property)
(sisl.physics.MonkhorstPack property)
kind() (sisl.physics.Spin property)
kindex() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
kpSileSiesta (class in sisl.io.siesta)
kpt() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
kT (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
kT() (sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
L
l (sisl.AtomicOrbital attribute)
,
[1]
(sisl.SphericalOrbital attribute)
,
[1]
lasto (sisl.Atoms attribute)
lasto() (sisl.Atoms property)
(sisl.Geometry property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
length() (sisl.SuperCell property)
lineark() (sisl.physics.BandStructure method)
(sisl.physics.brillouinzone.BandStructure method)
lineartick() (sisl.physics.BandStructure method)
(sisl.physics.brillouinzone.BandStructure method)
list2str() (in module sisl.utils)
locpotSileVASP (class in sisl.io.vasp)
lorentzian() (in module sisl.physics)
(in module sisl.physics.distribution)
lstranges() (in module sisl.utils)
M
m (sisl.AtomicOrbital attribute)
,
[1]
m_e (in module sisl.constant)
m_p (in module sisl.constant)
mass (sisl.Atom attribute)
(sisl.Atoms attribute)
mass() (sisl.Atoms property)
(sisl.Geometry property)
math_eval() (in module sisl.utils)
maxR() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
mean() (sisl.Grid method)
metric() (sisl.Selector property)
mgrid() (sisl.Grid class method)
mirror() (sisl.Geometry method)
mode() (sisl.physics.EigenmodePhonon property)
(sisl.physics.EigenvectorPhonon property)
(sisl.physics.phonon.EigenmodePhonon property)
(sisl.physics.phonon.EigenvectorPhonon property)
(sisl.physics.phonon.ModeCPhonon property)
(sisl.physics.phonon.ModePhonon property)
ModeCPhonon (class in sisl.physics.phonon)
ModePhonon (class in sisl.physics.phonon)
module
sisl
sisl.constant
,
[1]
sisl.geom
sisl.io
sisl.io.bigdft
sisl.io.gulp
sisl.io.openmx
sisl.io.scaleup
sisl.io.siesta
sisl.io.tbtrans
sisl.io.vasp
sisl.io.wannier90
sisl.physics
sisl.physics.bloch
sisl.physics.brillouinzone
sisl.physics.distribution
sisl.physics.electron
sisl.physics.phonon
sisl.shape
sisl.unit
sisl.utils
moldenSile (class in sisl.io.molden)
molecules() (sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
MonkhorstPack (class in sisl.physics)
(class in sisl.physics.brillouinzone)
move() (sisl.Geometry method)
(sisl.SuperCell method)
mu() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
mulliken() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
N
n (sisl.AtomicOrbital attribute)
,
[1]
n_btd() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
n_s (sisl.Geometry attribute)
(sisl.SuperCell attribute)
n_s() (sisl.Geometry property)
(sisl.Grid property)
na (sisl.Geometry attribute)
na() (sisl.Geometry property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
na_b() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
na_buffer() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
na_d() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
na_dev() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
na_s() (sisl.Geometry property)
na_u() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
name() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
names() (sisl.Geometry property)
nanoribbon() (in module sisl.geom)
nanotube() (in module sisl.geom)
ncol (sisl.SparseCSR attribute)
,
[1]
ncSileSiesta (class in sisl.io.siesta)
nE() (sisl.io.tbtrans.phtavncSilePHtrans property)
ne() (sisl.io.tbtrans.phtavncSilePHtrans property)
nE() (sisl.io.tbtrans.phtncSilePHtrans property)
ne() (sisl.io.tbtrans.phtncSilePHtrans property)
nE() (sisl.io.tbtrans.phtprojncSilePHtrans property)
ne() (sisl.io.tbtrans.phtprojncSilePHtrans property)
nE() (sisl.io.tbtrans.phtsencSilePHtrans property)
ne() (sisl.io.tbtrans.phtsencSilePHtrans property)
nE() (sisl.io.tbtrans.tbtavncSileTBtrans property)
ne() (sisl.io.tbtrans.tbtavncSileTBtrans property)
nE() (sisl.io.tbtrans.tbtncSileTBtrans property)
ne() (sisl.io.tbtrans.tbtncSileTBtrans property)
nE() (sisl.io.tbtrans.tbtprojncSileTBtrans property)
ne() (sisl.io.tbtrans.tbtprojncSileTBtrans property)
nE() (sisl.io.tbtrans.tbtsencSileTBtrans property)
ne() (sisl.io.tbtrans.tbtsencSileTBtrans property)
NEUMANN (sisl.Grid attribute)
next() (sisl.Selector method)
nk() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
nkpt() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
nnz (sisl.SparseCSR attribute)
nnz() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
no (sisl.Atom attribute)
(sisl.Atoms attribute)
(sisl.Geometry attribute)
no() (sisl.Atom property)
(sisl.Atoms property)
(sisl.Geometry property)
(sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
no_d() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
no_down() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
no_s (sisl.Geometry attribute)
no_s() (sisl.Geometry property)
no_u() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
noise_power (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
(sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
noise_power() (sisl.io.tbtrans.tbtncSileTBtrans method)
non_orthogonal() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
NONCOLINEAR (sisl.physics.Spin attribute)
nonzero() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
norm() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.Quaternion method)
norm2() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
normalize() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
nsc (sisl.SuperCell attribute)
nsc() (sisl.Geometry property)
(sisl.Grid property)
nspecie() (sisl.Atoms property)
NullShape (class in sisl.shape)
O
o2a() (sisl.Geometry method)
o2isc() (sisl.Geometry method)
o2p() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
o2sc() (sisl.Geometry method)
o2transpose() (sisl.Geometry method)
o_dev() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
occupation() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
offset() (sisl.SuperCell method)
omxSileOpenMX (class in sisl.io.openmx)
onlysSileSiesta (class in sisl.io.siesta)
OPEN (sisl.Grid attribute)
oplist (class in sisl)
optimize_nsc() (sisl.Geometry method)
orb (sisl.AtomicOrbital attribute)
orbindxSileSiesta (class in sisl.io.siesta)
Orbital (class in sisl)
orbital() (sisl.Atoms method)
orbital_ACOHP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
orbital_ACOOP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
orbital_COHP (sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
orbital_COHP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_COOP (sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
orbital_COOP() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
orbital_current() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
orbital_momentum() (sisl.physics.DensityMatrix method)
orbitals (sisl.Geometry attribute)
orbitals() (sisl.Atoms property)
(sisl.Geometry property)
orboccSileScaleUp (class in sisl.io.scaleup)
ordered (sisl.Selector attribute)
ordered() (sisl.Selector property)
origo() (sisl.Geometry property)
(sisl.Grid property)
(sisl.shape.Cube property)
(sisl.shape.Cuboid property)
(sisl.SuperCell property)
oRij() (sisl.Geometry method)
orij() (sisl.Geometry method)
orthogonal() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
osc2uc() (sisl.Geometry method)
ouc2sc() (sisl.Geometry method)
outer() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
outSileSiesta (class in sisl.io.siesta)
Overlap (class in sisl.physics)
overlap() (sisl.Geometry method)
P
P (sisl.AtomicOrbital attribute)
,
[1]
parallel() (sisl.SuperCell method)
param_circle() (sisl.physics.BandStructure class method)
(sisl.physics.BrillouinZone class method)
(sisl.physics.brillouinzone.BandStructure class method)
(sisl.physics.brillouinzone.BrillouinZone class method)
(sisl.physics.brillouinzone.MonkhorstPack class method)
(sisl.physics.MonkhorstPack class method)
parameters() (sisl.SuperCell method)
parametrize() (sisl.physics.BandStructure class method)
(sisl.physics.BrillouinZone class method)
(sisl.physics.brillouinzone.BandStructure class method)
(sisl.physics.brillouinzone.BrillouinZone class method)
(sisl.physics.brillouinzone.MonkhorstPack class method)
(sisl.physics.MonkhorstPack class method)
parent (sisl.physics.Coefficient attribute)
,
[1]
(sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvalueElectron attribute)
(sisl.physics.EigenvaluePhonon attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.electron.CoefficientElectron attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvalueElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.CoefficientPhonon attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvaluePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
(sisl.physics.State attribute)
,
[1]
(sisl.physics.StateC attribute)
,
[1]
pdbSile (class in sisl.io.pdb)
PDOS() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.Hamiltonian method)
(sisl.physics.phonon.EigenmodePhonon method)
pdosSileSiesta (class in sisl.io.siesta)
PERIODIC (sisl.Grid attribute)
PeriodicTable (class in sisl)
phase() (sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
phonon_temperature() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
phtavncSilePHtrans (class in sisl.io.tbtrans)
phtncSilePHtrans (class in sisl.io.tbtrans)
phtprojncSilePHtrans (class in sisl.io.tbtrans)
phtsencSilePHtrans (class in sisl.io.tbtrans)
PhysicalConstant (class in sisl.constant)
pivot() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
pivot_down() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
plane() (sisl.SuperCell method)
POLARIZED (sisl.physics.Spin attribute)
pop() (sisl.oplist method)
prepend() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.Selector method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
print() (sisl.io.siesta.fdfSileSiesta static method)
projections() (sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
psi() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
psi_spher() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
ptr (sisl.SparseCSR attribute)
,
[1]
pyamg_boundary_condition() (sisl.Grid method)
pyamg_fix() (sisl.Grid method)
pyamg_index() (sisl.Grid method)
pyamg_source() (sisl.Grid class method)
Q
q (in module sisl.constant)
q0 (sisl.Atom attribute)
(sisl.AtomicOrbital attribute)
,
[1]
(sisl.Atoms attribute)
(sisl.Orbital attribute)
,
[1]
(sisl.SphericalOrbital attribute)
,
[1]
q0() (sisl.Atom property)
(sisl.Atoms property)
(sisl.Geometry property)
Quaternion (class in sisl)
R
R (sisl.Atom attribute)
(sisl.AtomicOrbital attribute)
,
[1]
(sisl.Orbital attribute)
,
[1]
(sisl.SphericalOrbital attribute)
,
[1]
R() (sisl.Atom property)
radial() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
radian() (sisl.Quaternion property)
radii() (sisl.PeriodicTable method)
radius() (sisl.Atom method)
(sisl.PeriodicTable method)
(sisl.shape.Ellipsoid property)
(sisl.shape.Sphere property)
rcell (sisl.SuperCell attribute)
rcell() (sisl.Geometry property)
(sisl.Grid property)
(sisl.physics.BandStructure property)
(sisl.physics.BrillouinZone property)
(sisl.physics.brillouinzone.BandStructure property)
(sisl.physics.brillouinzone.BrillouinZone property)
(sisl.physics.brillouinzone.MonkhorstPack property)
(sisl.physics.MonkhorstPack property)
(sisl.SuperCell property)
read() (sisl.Geometry static method)
(sisl.Grid static method)
(sisl.io.BaseSile method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.wfsxSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
(sisl.physics.DensityMatrix static method)
(sisl.physics.DynamicalMatrix static method)
(sisl.physics.EnergyDensityMatrix static method)
(sisl.physics.Hamiltonian static method)
(sisl.physics.Overlap static method)
(sisl.SuperCell static method)
read_atom() (sisl.io.scaleup.orboccSileScaleUp method)
read_basis() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
read_brillouinzone() (sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
read_data() (sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
read_delta() (sisl.io.tbtrans.deltancSileTBtrans method)
read_density_matrix() (sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
read_dynamical_matrix() (sisl.io.gulp.gotSileGULP method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
read_energy_density_matrix() (sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
read_fermi_level() (sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
read_force() (sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
read_force_constant() (sisl.io.gulp.fcSileGULP method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
read_geometry() (sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
read_grid() (sisl.io.cube.cubeSile method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
read_grid_size() (sisl.io.siesta.gridSileSiesta method)
read_hamiltonian() (sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.wannier90.winSileWannier90 method)
read_header() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
read_moment() (sisl.io.siesta.outSileSiesta method)
read_overlap() (sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
read_scf() (sisl.io.siesta.outSileSiesta method)
read_self_energy() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
read_species() (sisl.io.siesta.outSileSiesta method)
read_stress() (sisl.io.siesta.outSileSiesta method)
read_super() (sisl.io.gulp.gotSileGULP method)
read_supercell() (sisl.io.cube.cubeSile method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
read_supercell_nsc() (sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
read_velocity() (sisl.io.siesta.xvSileSiesta method)
real (sisl.constant.PhysicalConstant attribute)
real_space_coupling() (sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
real_space_parent() (sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
RealSpaceSE (class in sisl.physics)
RealSpaceSI (class in sisl.physics)
RecursiveSI (class in sisl.physics)
reduce() (sisl.Atoms method)
(sisl.Geometry method)
reflection() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
refSileScaleUp (class in sisl.io.scaleup)
remove() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.oplist method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
remove_orbital() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseOrbital method)
remove_part() (sisl.Grid method)
reorder() (sisl.Atoms method)
(sisl.Geometry method)
repeat() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
replace() (sisl.Atoms method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
replace_atom() (sisl.Atoms method)
reset() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.Selector method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
reverse() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.oplist method)
rhamSileScaleUp (class in sisl.io.scaleup)
Rij() (sisl.Geometry method)
rij() (sisl.Geometry method)
Rij() (sisl.physics.DensityMatrix method)
rij() (sisl.physics.DensityMatrix method)
Rij() (sisl.physics.DynamicalMatrix method)
rij() (sisl.physics.DynamicalMatrix method)
Rij() (sisl.physics.EnergyDensityMatrix method)
rij() (sisl.physics.EnergyDensityMatrix method)
Rij() (sisl.physics.Hamiltonian method)
rij() (sisl.physics.Hamiltonian method)
Rij() (sisl.physics.Overlap method)
rij() (sisl.physics.Overlap method)
Rij() (sisl.physics.SparseOrbitalBZ method)
rij() (sisl.physics.SparseOrbitalBZ method)
Rij() (sisl.physics.SparseOrbitalBZSpin method)
rij() (sisl.physics.SparseOrbitalBZSpin method)
Rij() (sisl.SparseAtom method)
rij() (sisl.SparseAtom method)
Rij() (sisl.SparseOrbital method)
rij() (sisl.SparseOrbital method)
rkpSileSiesta (class in sisl.io.siesta)
rotate() (sisl.Geometry method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.Quaternion method)
(sisl.SuperCell method)
rotate_miller() (sisl.Geometry method)
routines (sisl.Selector attribute)
routines() (sisl.Selector property)
S
S() (sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
sc (sisl.Geometry attribute)
sc() (in module sisl.geom)
sc2uc() (sisl.Geometry method)
sc_index() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
sc_off() (sisl.Geometry property)
(sisl.Grid property)
(sisl.SuperCell property)
scale() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Orbital method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
(sisl.SphericalOrbital method)
(sisl.SuperCell method)
scale_columns() (sisl.SparseCSR method)
scattering_matrix() (sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
(sisl.physics.RecursiveSI method)
(sisl.physics.SelfEnergy method)
(sisl.physics.SemiInfinite method)
se2scat() (sisl.physics.RealSpaceSE static method)
(sisl.physics.RealSpaceSI static method)
(sisl.physics.RecursiveSI static method)
(sisl.physics.SelfEnergy static method)
(sisl.physics.SemiInfinite static method)
select_best() (sisl.Selector method)
Selector (class in sisl)
self_energy() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
(sisl.physics.RecursiveSI method)
(sisl.physics.SelfEnergy method)
(sisl.physics.SemiInfinite method)
self_energy_average() (sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
self_energy_lr() (sisl.physics.RecursiveSI method)
SelfEnergy (class in sisl.physics)
SemiInfinite (class in sisl.physics)
set() (sisl.io.siesta.fdfSileSiesta method)
set_bc() (sisl.Grid method)
set_boundary() (sisl.Grid method)
set_boundary_condition() (sisl.Grid method)
set_center() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.Sphere method)
set_dyn_key() (sisl.io.gulp.gotSileGULP method)
set_dynamical_matrix_key() (sisl.io.gulp.gotSileGULP method)
set_geom() (sisl.Grid method)
set_geometry() (sisl.Grid method)
set_geometry_key() (sisl.io.gulp.gotSileGULP method)
set_grid() (sisl.Grid method)
set_key() (sisl.io.gulp.gotSileGULP method)
set_nsc() (sisl.Geometry method)
(sisl.Grid method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
set_options() (sisl.physics.RealSpaceSE method)
(sisl.physics.RealSpaceSI method)
set_origo() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
set_parent() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
set_radial() (sisl.AtomicOrbital method)
(sisl.SphericalOrbital method)
set_sc() (sisl.Geometry method)
(sisl.Grid method)
set_supercell() (sisl.Geometry method)
(sisl.Grid method)
set_supercell_key() (sisl.io.gulp.gotSileGULP method)
Shape (class in sisl.shape)
shape (sisl.SparseCSR attribute)
shape() (sisl.Grid property)
(sisl.physics.Coefficient property)
(sisl.physics.DensityMatrix property)
(sisl.physics.DynamicalMatrix property)
(sisl.physics.EigenmodePhonon property)
(sisl.physics.EigenstateElectron property)
(sisl.physics.EigenvalueElectron property)
(sisl.physics.EigenvaluePhonon property)
(sisl.physics.EigenvectorElectron property)
(sisl.physics.EigenvectorPhonon property)
(sisl.physics.electron.CoefficientElectron property)
(sisl.physics.electron.EigenstateElectron property)
(sisl.physics.electron.EigenvalueElectron property)
(sisl.physics.electron.EigenvectorElectron property)
(sisl.physics.electron.StateCElectron property)
(sisl.physics.electron.StateElectron property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.Overlap property)
(sisl.physics.phonon.CoefficientPhonon property)
(sisl.physics.phonon.EigenmodePhonon property)
(sisl.physics.phonon.EigenvaluePhonon property)
(sisl.physics.phonon.EigenvectorPhonon property)
(sisl.physics.phonon.ModeCPhonon property)
(sisl.physics.phonon.ModePhonon property)
(sisl.physics.SparseOrbitalBZ property)
(sisl.physics.SparseOrbitalBZSpin property)
(sisl.physics.State property)
(sisl.physics.StateC property)
(sisl.SparseAtom property)
(sisl.SparseCSR property)
(sisl.SparseOrbital property)
shift() (sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
shot_noise (sisl.io.tbtrans.phtavncSilePHtrans attribute)
(sisl.io.tbtrans.phtncSilePHtrans attribute)
(sisl.io.tbtrans.phtprojncSilePHtrans attribute)
(sisl.io.tbtrans.tbtavncSileTBtrans attribute)
(sisl.io.tbtrans.tbtprojncSileTBtrans attribute)
shot_noise() (sisl.io.tbtrans.tbtncSileTBtrans method)
Sile (class in sisl.io)
SileBin (class in sisl.io)
SileCDF (class in sisl.io)
SileError
sisl
module
sisl.constant
module
,
[1]
sisl.geom
module
sisl.io
module
sisl.io.bigdft
module
sisl.io.gulp
module
sisl.io.openmx
module
sisl.io.scaleup
module
sisl.io.siesta
module
sisl.io.tbtrans
module
sisl.io.vasp
module
sisl.io.wannier90
module
sisl.physics
module
sisl.physics.bloch
module
sisl.physics.brillouinzone
module
sisl.physics.distribution
module
sisl.physics.electron
module
sisl.physics.phonon
module
sisl.shape
module
sisl.unit
module
sisl.utils
module
size() (sisl.Grid property)
Sk() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
sort() (sisl.Geometry method)
(sisl.oplist method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.StateC method)
spalign() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
SparseAtom (class in sisl)
SparseCSR (class in sisl)
SparseOrbital (class in sisl)
SparseOrbitalBZ (class in sisl.physics)
SparseOrbitalBZSpin (class in sisl.physics)
sparserij() (sisl.Geometry method)
specie (sisl.Atoms attribute)
specie() (sisl.Atoms property)
spher() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
Sphere (class in sisl.shape)
SphericalOrbital (class in sisl)
Spin (class in sisl.physics)
spin() (sisl.physics.DensityMatrix property)
(sisl.physics.EnergyDensityMatrix property)
(sisl.physics.Hamiltonian property)
(sisl.physics.SparseOrbitalBZSpin property)
spin_align() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
spin_moment() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.Hamiltonian method)
spin_orbital_moment() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
spin_rotate() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
spin_squared() (in module sisl.physics.electron)
(sisl.physics.Hamiltonian method)
SPINORBIT (sisl.physics.Spin attribute)
spins() (sisl.physics.Spin property)
spsame() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
start() (sisl.Selector method)
State (class in sisl.physics)
state (sisl.physics.EigenmodePhonon attribute)
(sisl.physics.EigenstateElectron attribute)
(sisl.physics.EigenvectorElectron attribute)
(sisl.physics.EigenvectorPhonon attribute)
(sisl.physics.electron.EigenstateElectron attribute)
(sisl.physics.electron.EigenvectorElectron attribute)
(sisl.physics.electron.StateCElectron attribute)
(sisl.physics.electron.StateElectron attribute)
(sisl.physics.phonon.EigenmodePhonon attribute)
(sisl.physics.phonon.EigenvectorPhonon attribute)
(sisl.physics.phonon.ModeCPhonon attribute)
(sisl.physics.phonon.ModePhonon attribute)
(sisl.physics.State attribute)
,
[1]
(sisl.physics.StateC attribute)
,
[1]
StateC (class in sisl.physics)
StateCElectron (class in sisl.physics.electron)
StateElectron (class in sisl.physics.electron)
step_function() (in module sisl.physics)
(in module sisl.physics.distribution)
stop() (sisl.Selector method)
str_spec() (in module sisl.utils)
strerror (sisl.io.SileError attribute)
strmap() (in module sisl.utils)
strseq() (in module sisl.utils)
sub() (sisl.Atom method)
(sisl.Atoms method)
(sisl.Geometry method)
(sisl.Grid method)
(sisl.physics.Coefficient method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvalueElectron method)
(sisl.physics.EigenvaluePhonon method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.EigenvectorPhonon method)
(sisl.physics.electron.CoefficientElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvalueElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.phonon.CoefficientPhonon method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.EigenvaluePhonon method)
(sisl.physics.phonon.EigenvectorPhonon method)
(sisl.physics.phonon.ModeCPhonon method)
(sisl.physics.phonon.ModePhonon method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.physics.State method)
(sisl.physics.StateC method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
sub_orbital() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseOrbital method)
sub_part() (sisl.Grid method)
sum() (sisl.Grid method)
(sisl.SparseCSR method)
SuperCell (class in sisl)
swap() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
swap_atom() (sisl.Atoms method)
swapaxes() (sisl.Geometry method)
(sisl.Grid method)
(sisl.SuperCell method)
symbol() (sisl.Atom property)
T
tableSile (class in sisl.io.table)
tag (sisl.AtomicOrbital attribute)
,
[1]
(sisl.Orbital attribute)
,
[1]
(sisl.SphericalOrbital attribute)
,
[1]
tbtavncSileTBtrans (class in sisl.io.tbtrans)
tbtgfSileTBtrans (class in sisl.io.tbtrans)
tbtncSileTBtrans (class in sisl.io.tbtrans)
tbtprojncSileTBtrans (class in sisl.io.tbtrans)
tbtsencSileTBtrans (class in sisl.io.tbtrans)
tile() (sisl.Atoms method)
(sisl.Geometry method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
(sisl.SuperCell method)
toASE() (sisl.Geometry method)
toAtomicOrbital() (sisl.SphericalOrbital method)
tocartesian() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
tocell() (sisl.SuperCell class method)
tocsr() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseCSR method)
(sisl.SparseOrbital method)
toCuboid() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
(sisl.SuperCell method)
todense() (sisl.SparseCSR method)
toEllipsoid() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
toGrid() (sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.SphericalOrbital method)
topyamg() (sisl.Grid method)
toreduced() (sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.MonkhorstPack method)
toSparseAtom() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseOrbital method)
toSphere() (sisl.Atom method)
(sisl.AtomicOrbital method)
(sisl.Orbital method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
(sisl.SphericalOrbital method)
translate() (sisl.Geometry method)
(sisl.SuperCell method)
translate_columns() (sisl.SparseCSR method)
transmission() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
transmission_bulk() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
transmission_eig() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
transpose() (sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.Overlap method)
(sisl.physics.SparseOrbitalBZ method)
(sisl.physics.SparseOrbitalBZSpin method)
(sisl.SparseAtom method)
(sisl.SparseOrbital method)
trs() (sisl.physics.DensityMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.SparseOrbitalBZSpin method)
tsdeSileSiesta (class in sisl.io.siesta)
tsgfSileSiesta (class in sisl.io.siesta)
tshsSileSiesta (class in sisl.io.siesta)
tsvncSileSiesta (class in sisl.io.siesta)
type() (sisl.io.openmx.omxSileOpenMX method)
(sisl.io.siesta.fdfSileSiesta method)
U
uc2sc() (sisl.Geometry method)
unfold() (sisl.physics.Bloch method)
(sisl.physics.bloch.Bloch method)
unfold_points() (sisl.physics.Bloch method)
(sisl.physics.bloch.Bloch method)
unit() (sisl.constant.PhysicalConstant property)
unit_convert() (in module sisl.unit)
unit_default() (in module sisl.unit)
unit_group() (in module sisl.unit)
units (in module sisl.unit)
UNPOLARIZED (sisl.physics.Spin attribute)
V
vector_current() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
vector_current_from_bond() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
velocity() (in module sisl.physics.electron)
(in module sisl.physics.phonon)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EigenmodePhonon method)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.Hamiltonian method)
(sisl.physics.phonon.EigenmodePhonon method)
(sisl.physics.phonon.ModeCPhonon method)
velocity_matrix() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.StateCElectron method)
volume (sisl.SuperCell attribute)
volume() (sisl.Geometry property)
(sisl.Grid property)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Sphere method)
W
wavefunction() (in module sisl.physics.electron)
(sisl.physics.EigenstateElectron method)
(sisl.physics.EigenvectorElectron method)
(sisl.physics.electron.EigenstateElectron method)
(sisl.physics.electron.EigenvectorElectron method)
(sisl.physics.electron.StateCElectron method)
(sisl.physics.electron.StateElectron method)
weight() (sisl.physics.BandStructure property)
(sisl.physics.BrillouinZone property)
(sisl.physics.brillouinzone.BandStructure property)
(sisl.physics.brillouinzone.BrillouinZone property)
(sisl.physics.brillouinzone.MonkhorstPack property)
(sisl.physics.MonkhorstPack property)
wfsxSileSiesta (class in sisl.io.siesta)
winSileWannier90 (class in sisl.io.wannier90)
with_traceback() (sisl.io.SileError method)
within() (sisl.Geometry method)
(sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
within_index() (sisl.shape.Cube method)
(sisl.shape.Cuboid method)
(sisl.shape.Ellipsoid method)
(sisl.shape.NullShape method)
(sisl.shape.Shape method)
(sisl.shape.Sphere method)
within_inf() (sisl.Geometry method)
within_sc() (sisl.Geometry method)
wk() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
wkpt() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
write() (sisl.Geometry method)
(sisl.Grid method)
(sisl.io.BaseSile method)
(sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.gulp.fcSileGULP method)
(sisl.io.gulp.gotSileGULP method)
(sisl.io.molden.moldenSile method)
(sisl.io.openmx.omxSileOpenMX method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.orboccSileScaleUp method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.scaleup.rhamSileScaleUp method)
(sisl.io.siesta.bandsSileSiesta method)
(sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.eigSileSiesta method)
(sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.fcSileSiesta method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.gridSileSiesta method)
(sisl.io.siesta.hsxSileSiesta method)
(sisl.io.siesta.ionncSileSiesta method)
(sisl.io.siesta.ionxmlSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.onlysSileSiesta method)
(sisl.io.siesta.orbindxSileSiesta method)
(sisl.io.siesta.outSileSiesta method)
(sisl.io.siesta.pdosSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.siesta.wfsxSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.Sile method)
(sisl.io.SileBin method)
(sisl.io.SileCDF method)
(sisl.io.table.tableSile method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.phtsencSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
(sisl.io.tbtrans.tbtsencSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.doscarSileVASP method)
(sisl.io.vasp.eigenvalSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
(sisl.physics.BandStructure method)
(sisl.physics.BrillouinZone method)
(sisl.physics.brillouinzone.BandStructure method)
(sisl.physics.brillouinzone.BrillouinZone method)
(sisl.physics.brillouinzone.MonkhorstPack method)
(sisl.physics.DensityMatrix method)
(sisl.physics.DynamicalMatrix method)
(sisl.physics.EnergyDensityMatrix method)
(sisl.physics.Hamiltonian method)
(sisl.physics.MonkhorstPack method)
(sisl.physics.Overlap method)
write_basis() (sisl.io.siesta.ncSileSiesta method)
write_brillouinzone() (sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
write_data() (sisl.io.siesta.faSileSiesta method)
(sisl.io.siesta.kpSileSiesta method)
(sisl.io.siesta.rkpSileSiesta method)
(sisl.io.table.tableSile method)
write_delta() (sisl.io.tbtrans.deltancSileTBtrans method)
write_density_matrices() (sisl.io.siesta.tsdeSileSiesta method)
write_density_matrix() (sisl.io.siesta.dmSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsdeSileSiesta method)
write_dynamical_matrix() (sisl.io.siesta.ncSileSiesta method)
write_energy_density_matrix() (sisl.io.siesta.ncSileSiesta method)
write_force() (sisl.io.siesta.faSileSiesta method)
write_geometry() (sisl.io.bigdft.asciiSileBigDFT method)
(sisl.io.cube.cubeSile method)
(sisl.io.molden.moldenSile method)
(sisl.io.pdb.pdbSile method)
(sisl.io.scaleup.refSileScaleUp method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.xvSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.vasp.carSileVASP method)
(sisl.io.vasp.chgSileVASP method)
(sisl.io.vasp.locpotSileVASP method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
(sisl.io.xyz.xyzSile method)
write_grid() (sisl.io.cube.cubeSile method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.xsf.xsfSile method)
write_hamiltonian() (sisl.io.siesta.ncSileSiesta method)
(sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.siesta.tshsSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_header() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_overlap() (sisl.io.siesta.ncSileSiesta method)
write_self_energy() (sisl.io.siesta.tsgfSileSiesta method)
(sisl.io.tbtrans.tbtgfSileTBtrans method)
write_supercell() (sisl.io.cube.cubeSile method)
(sisl.io.molden.moldenSile method)
(sisl.io.pdb.pdbSile method)
(sisl.io.siesta.fdfSileSiesta method)
(sisl.io.siesta.gridncSileSiesta method)
(sisl.io.siesta.tsvncSileSiesta method)
(sisl.io.tbtrans.deltancSileTBtrans method)
(sisl.io.wannier90.winSileWannier90 method)
(sisl.io.xsf.xsfSile method)
write_tbtav() (sisl.io.tbtrans.phtavncSilePHtrans method)
(sisl.io.tbtrans.phtncSilePHtrans method)
(sisl.io.tbtrans.phtprojncSilePHtrans method)
(sisl.io.tbtrans.tbtavncSileTBtrans method)
(sisl.io.tbtrans.tbtncSileTBtrans method)
(sisl.io.tbtrans.tbtprojncSileTBtrans method)
X
X (sisl.physics.Spin attribute)
xa() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
xsfSile (class in sisl.io.xsf)
xvSileSiesta (class in sisl.io.siesta)
xyz (sisl.Geometry attribute)
xyz() (sisl.io.tbtrans.phtavncSilePHtrans property)
(sisl.io.tbtrans.phtncSilePHtrans property)
(sisl.io.tbtrans.phtprojncSilePHtrans property)
(sisl.io.tbtrans.phtsencSilePHtrans property)
(sisl.io.tbtrans.tbtavncSileTBtrans property)
(sisl.io.tbtrans.tbtncSileTBtrans property)
(sisl.io.tbtrans.tbtprojncSileTBtrans property)
(sisl.io.tbtrans.tbtsencSileTBtrans property)
xyzSile (class in sisl.io.xyz)
Y
Y (sisl.physics.Spin attribute)
yield_eigenstate() (sisl.io.siesta.wfsxSileSiesta method)
Z
Z (sisl.Atom attribute)
(sisl.AtomicOrbital attribute)
,
[1]
(sisl.physics.Spin attribute)
Z() (sisl.Atoms property)
(sisl.PeriodicTable method)
Z_int() (sisl.PeriodicTable method)
Z_label() (sisl.PeriodicTable method)
Z_short() (sisl.PeriodicTable method)
zgnr() (in module sisl.geom)
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