sisl.io.siesta.tshsSileSiesta

class sisl.io.siesta.tshsSileSiesta(filename, mode='r', *args, **kwargs)

Bases: sisl.io.siesta.onlysSileSiesta

Geometry, Hamiltonian and overlap matrix file

Methods

dir_file([filename, filename_base])

File of the current Sile

read(*args, **kwargs)

Generic read method which should be overloaded in child-classes

read_fermi_level()

Query the Fermi-level contained in the file

read_geometry([geometry])

Returns Geometry object from a TranSiesta file

read_hamiltonian(**kwargs)

Returns the electronic structure from the siesta.TSHS file

read_overlap(**kwargs)

Returns the overlap matrix from the TranSiesta file

read_supercell()

Returns a SuperCell object from a TranSiesta file

write(*args, **kwargs)

Generic write method which should be overloaded in child-classes

write_hamiltonian(H, **kwargs)

Writes the Hamiltonian to a siesta.TSHS file

base_file

File of the current Sile

file

File of the current Sile

__init__(filename, mode='r', *args, **kwargs)
property base_file

File of the current Sile

dir_file(filename=None, filename_base='')

File of the current Sile

property file

File of the current Sile

read(*args, **kwargs)

Generic read method which should be overloaded in child-classes

Parameters

kwargs – keyword arguments will try and search for the attribute read_<> and call it with the remaining **kwargs as arguments.

read_fermi_level()

Query the Fermi-level contained in the file

Returns

Ef

Return type

fermi-level of the system

read_geometry(geometry=None)

Returns Geometry object from a TranSiesta file

read_hamiltonian(**kwargs)[source]

Returns the electronic structure from the siesta.TSHS file

read_overlap(**kwargs)

Returns the overlap matrix from the TranSiesta file

read_supercell()

Returns a SuperCell object from a TranSiesta file

write(*args, **kwargs)

Generic write method which should be overloaded in child-classes

Parameters

**kwargs – keyword arguments will try and search for the attribute write_ and call it with the remaining **kwargs as arguments.

write_hamiltonian(H, **kwargs)[source]

Writes the Hamiltonian to a siesta.TSHS file